Sommer B, Beger M, Harrison PL, Babcock RC, Pandolfi JM Differential response to abiotic stress controls species distributions at biogeographic transition zones Ecography 41 478-490, 2018
DOI:10.1111/ecog.02986
View abstract
Understanding range limits is critical to predicting species responses to climate change. Subtropical environments, where many species overlap at their range margins, are cooler, more light-limited and variable than tropical environments. It is thus likely that species respond variably to these multi-stressor regimes and that factors other than mean climatic conditions drive biodiversity patterns. Here, we tested these hypotheses for scleractinian corals at their high-latitude range limits in eastern Australia and investigated the role of mean climatic conditions and of parameters linked to abiotic stress in explaining the distribution and abundance of different groups of species. We found that environmental drivers varied among taxa and were predominantly linked to abiotic stress. The distribution and abundance of tropical species and gradients in species richness (alpha diversity) and turnover (beta diversity) were best explained by light limitation, whereas minimum temperatures and temperature fluctuations best explained gradients in subtropical species, species nestedness and functional diversity. Variation in community structure (considering species composition and abundance) was most closely linked to the combined thermal and light regime. Our study demonstrates the role of abiotic stress in controlling the distribution of species towards their high-latitude range limits and suggests that, at biogeographic transition zones, robust predictions of the impacts of climate change require approaches that account for various aspects of
physiological stress and for species abundances and characteristics. These findings support the hypothesis that abiotic stress controls high-latitude range limits and caution that projections solely based on mean temperature could underestimate species’ vulnerabilities to climate change.
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Álvarez-Romero JG, Munguía-Vega A, Beger M, del Mar Mancha-Cisneros M, Suárez-Castillo AN, Gurney GG, Pressey RL, Gerber LR, Morzaria-Luna HN, Reyes-Bonilla H, Adams VM, Kolb M, Graham EM, VanDerWal J, Castillo-López A, Hinojosa-Arango G, Petatán-Ramírez D, Moreno-Baez M, Godínez-Reyes CR, Torre J Designing connected marine reserves in the face of global warming Global Change Biology 24 e671-e691, 2018
DOI:10.1111/gcb.13989
View abstract
© 2017 John Wiley&Sons Ltd Marine reserves are widely used to protect species important for conservation and fisheries and to help maintain ecological processes that sustain their populations, including recruitment and dispersal. Achieving these goals requires well-connected networks of marine reserves that maximize larval connectivity, thus allowing exchanges between populations and recolonization after local disturbances. However, global warming can disrupt connectivity by shortening potential dispersal pathways through changes in larval physiology. These changes can compromise the performance of marine reserve networks, thus requiring adjusting their design to account for ocean warming. To date, empirical approaches to marine prioritization have not considered larval connectivity as affected by global warming. Here, we develop a framework for designing marine reserve networks that integrates graph theory and changes in larval connectivity due to potential reductions in planktonic larval duration (PLD) associated with ocean warming, given current socioeconomic constraints. Using the Gulf of California as case study, we assess the benefits and costs of adjusting networks to account for connectivity, with and without ocean warming. We compare reserve networks designed to achieve representation of species and ecosystems with networks designed to also maximize connectivity under current and future ocean-warming scenarios. Our results indicate that current larval connectivity could be reduced significantly under ocean warming because of shortened PLDs. Given the potential changes in connectivity, we show that our graph-theoretical approach based on centrality (eigenvector and distance-weighted fragmentation) of habitat patches can help design better-connected marine reserve networks for the future with equivalent costs. We found that maintaining dispersal connectivity incidentally through representation-only reserve design is unlikely, particularly in regions with strong asymmetric patterns of dispersal connectivity. Our results support previous studies suggesting that, given potential reductions in PLD due to ocean warming, future marine reserve networks would require more and/or larger reserves in closer proximity to maintain larval connectivity.
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Levin N, Beger M, Maina J, McClanahan T, Kark S Evaluating the potential for transboundary management of marine biodiversity in the Western Indian Ocean Australasian Journal of Environmental Management 25 62-85, 2018
DOI:10.1080/14486563.2017.1417167
View abstract
The economic and socio-political interactions between countries can have major impacts on transboundary conservation decisions and outcomes. Here, we examined for 14 Western Indian Ocean (WIO) continental and island nations the extent of their marine coral reef species, fisheries and marine protected areas (MPAs), in the context of their geopolitical and socio-economic connections. We also examined the role of external countries and organisations in collaboration within the region. We found large variation between the different countries in their protected area size, and management, which result from different interests in establishing the MPAs, ranging from fisheries management, biodiversity conservation to asserting sovereignty claims. Seventy-four per cent of the 154 MPAs in the region belong to island nations; however, the largest MPAs in the WIO were established by European powers, and include Mayotte and Glorioso Islands (France) and Chagos (UK). While the majority of MPAs are managed by individual countries, between-country collaboration within and outside the region is key if the aim is to achieve effective conservation of ecosystems and species across the island and mainland nations in the region. This may be advanced by creating transboundary MPAs and by regional conservation investment by external powers that benefit from the region’s resources.
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Reynolds SD, Norman BM, Beger M, Franklin CE, Dwyer RG Movement, distribution and marine reserve use by an endangered migratory giant Diversity and Distributions 23 1268-1279, 2017
DOI:10.1111/ddi.12618
View abstract
Aim
Understanding the spatial and temporal variation in the distribution of migratory species is critical for management and conservation efforts. However, challenges in observing mobile marine species throughout their migratory pathways can impede the identification of critical habitat, linkages between these habitats and threat-mitigation strategies. This study aimed to gain insight into the long-term residency and movement patterns of the whale shark (Rhincodon typus) and to reveal important habitat in the context of R. typus usage of existing Marine Protected Areas (MPAs).
Location
South-eastern Indian Ocean.
Methods
Satellite telemetry was used to remotely track the long-term movements of 29 R. typus, and to quantify shark usage of the existing MPA network. From the tracking data and environmental predictors, nonlinear models were developed to predict suitable R. typus habitat throughout the south-eastern Indian Ocean.
Results
This study includes the first documented complete return migrations by R. typus to Ningaloo Marine Park, which was found to be an important area for R. typus all year-round. We found that while existing MPAs along Australia's west coast do afford some protection to R. typus, telemetry-based habitat models revealed large areas of suitable habitat not currently protected, particularly along the Western Australian coast, in the Timor Sea, and in Indonesian and international waters.
Main conclusions
Animal-borne telemetric devices allowed the gathering of long-term spatial information from the elusive and highly mobile R. typus, revealing the spatial scale of their migration in the south-eastern Indian Ocean. Suitable habitat was predicted to occur inside conservation areas, but our findings indicate that the current MPA network may not sufficiently protect R. typus throughout the year. We suggest that telemetry-based habitat models can be an important tool to inform conservation planning and spatial management efforts for migratory species.
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Martin TSH, Connolly RM, Olds AD, Ceccarelli DM, Fenner DE, Schlacher TA, Beger M Subsistence harvesting by a small community does not substantially compromise coral reef fish assemblages ICES Journal of Marine Science 74 2191-2200, 2017
DOI:10.1093/icesjms/fsx043
View abstract
Fisheries usually first remove large predators before switching to smaller species, causing lasting changes to fish community structure. Reef fish provide essential protein and income for many people, and the impacts of commercial and high-intensity subsistence fishing on reef fish are well documented. However, how fish communities respond to low levels of subsistence fishing using traditional techniques (fishing for food, few fishers) is less well understood. We use three atolls in the Marshall Islands as a model system to quantify effects of commercial and subsistence fishing on reef fish communities, compared to a near-pristine baseline. Unexpectedly, fish biomass was highest on the commercially-fished atoll where the assemblage was dominated by herbivores (50% higher than other atolls) and contained few top predators (70% lower than other atolls). By contrast, fish biomass and trophic composition did not differ between pristine and subsistence-fished atolls– top predators were abundant on both. We show that in some cases, reefs can support fishing by small communities to provide food but still retain intact fish assemblages. Low-intensity subsistence fishing may not always harm marine food webs, and we suggest that its effects depend on the style and intensity of fishing practised and the type of organisms targeted.
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Saunders MI, Bode M, Atkinson S, Klein CJ, Metaxas A, Beher J, Beger M, Mills M, Giakoumi S, Tulloch V, Possingham HP Simple rules can guide whether land- or ocean-based conservation will best benefit marine ecosystems PLoS Biology 15, 2017
DOI:10.1371/journal.pbio.2001886
View abstract
© 2017 Saunders et al. Coastal marine ecosystems can be managed by actions undertaken both on the land and in the ocean. Quantifying and comparing the costs and benefits of actions in both realms is therefore necessary for efficient management. Here, we quantify the link between terrestrial sediment runoff and a downstream coastal marine ecosystem and contrast the cost-effectiveness of marine- and land-based conservation actions. We use a dynamic land- and sea-scape model to determine whether limited funds should be directed to 1 of 4 alternative conservation actions—protection on land, protection in the ocean, restoration on land, or restoration in the ocean—to maximise the extent of light-dependent marine benthic habitats across decadal timescales. We apply the model to a case study for a seagrass meadow in Australia. We find that marine restoration is the most cost-effective action over decadal timescales in this system, based on a conservative estimate of the rate at which seagrass can expand into a new habitat. The optimal decision will vary in different social–ecological contexts, but some basic information can guide optimal investments to counteract land- and ocean-based stressors: (1) marine restoration should be prioritised if the rates of marine ecosystem decline and expansion are similar and low; (2) marine protection should take precedence if the rate of marine ecosystem decline is high or if the adjacent catchment is relatively intact and has a low rate ofvegetation decline; (3) land-based actions are optimal when the ratio of marine ecosystem expansion to decline is greater than 1:1.4, with terrestrial restoration typically the most cost-effective action; and (4) land protection should be prioritised if the catchment is relatively intact but the rate of vegetation decline is high. These rules of thumb illustrate how cost-effective conservation outcomes for connected land–ocean systems can proceed without complex modelling.
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Sommer B, Sampayo EM, Beger M, Harrison PL, Babcock RC, Pandolfi JM Local and regional controls of phylogenetic structure at the high-latitude range limits of corals Proceedings of the Royal Society B: Biological Sciences 284, 2017
DOI:10.1098/rspb.2017.0915
View abstract
Understanding how range-edge populations will respond to climate change is an urgent research priority. Here, we used a phylogenetic community ecology approach to examine how ecological and evolutionary processes shape biodiversity patterns of scleractinian corals at their high-latitude range limits in eastern Australia. We estimated phylogenetic signal in seven ecologically important functional traits and conducted tests of phylogenetic structure at local and regional scales using the net relatedness (NRI) and nearest taxon indices (NTI) for the presence/absence and abundance data. Regional tests showed light phylogenetic clustering, indicating that coral species found in this subtropical-to-temperate transition zone are more closely related to each other than are species on the nearby, more northerly Great Barrier Reef. Local tests revealed variable patterns of phylogenetic clustering and overdispersion and higher than expected phylogenetic turnover among sites. In combination, these results are broadly consistent with the hierarchical filtering model, whereby species pass through a regional climatic filter based on their tolerances for marginal conditions and subsequently segregate into local assemblages according to the relative strength of habitat filtering and species interactions. Conservatism of tested traits suggests that corals will likely track their niches with climate change. Nevertheless, high turnover of lineages among sites indicates that range shifts will probably vary among species and highlights the vulnerability and conservation significance of high-latitude reefs.
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Nielsen ES, Beger M, Henriques R, Selkoe KA, von der Heyden S Multispecies genetic objectives in spatial conservation planning. Conservation Biology 31 872-882, 2017
DOI:10.1111/cobi.12875
View abstract
The growing threats to biodiversity and global alteration of habitats and species distributions make it increasingly necessary to consider evolutionary patterns in conservation decision-making. Yet there is no clear-cut guidance on how genetic features can be incorporated into conservation planning processes, with multiple molecular markers and several genetic metrics for each marker type to choose from. Genetic patterns also differ between species, but the potential trade-offs amongst genetic objectives for multiple species in conservation planning are currently understudied. This study compares spatial conservation prioritizations derived from two metrics of both genetic diversity (nucleotide and haplotype diversity) and genetic isolation (private haplotypes and local genetic differentiation) for mitochondrial DNA for five marine species. The findings show that conservation plans based solely on habitat representation noticeably differ from those additionally including genetic data, with habitat-based conservation plans selecting fewer conservation priority areas. Furthermore, all four genetic metrics selected approximately similar conservation priority areas, which is likely a result of prioritizing genetic patterns across a genetically diverse array of species. Largely, the results suggest that multi-species genetic conservation objectives are vital to create protected area networks that appropriately preserve community-level evolutionary patterns. This article is protected by copyright. All rights reserved.
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McGowan J, Beger M, Lewison RL, Harcourt R, Campbell H, Priest M, Dwyer RG, Lin HY, Lentini P, Dudgeon C, McMahon C, Watts M, Possingham HP Integrating research using animal-borne telemetry with the needs of conservation management Journal of Applied Ecology 54 423-429, 2017
DOI:10.1111/1365-2664.12755
View abstract
© 2016 The Authors. Journal of Applied Ecology © 2016 British Ecological Society Animal-borne telemetry has revolutionized our ability to study animal movement, species physiology, demography and social structures, changing environments and the threats that animals are experiencing. While there will always be a need for basic ecological research and discovery, the current conservation crisis deman ds we look more pragmatically at the data required to make informed management decisions. Here, we define a framework that distinguishes how research using animal telemetry devices can influence conservation. We then discuss two critical questions which aim to directly connect telemetry-derived data to applied conservation decision-making: (i) Would my choice of action change if I had more data? (ii) Is the expected gain worth the money and time required to collect more data? Policy implications. To answer questions about integrating telemetry-derived data with applied conservation, we suggest the use of value of information analysis to quantitatively assess the return-on-investment of animal telemetry-derived data for conservation decision-making.
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Hughes TP, Kerry JT,Álvarez-Noriega M, Álvarez-Romero JG, Anderson KD, Baird AH, Babcock RC, Beger M, Bellwood DR, Berkelmans R, Bridge TC, Butler IR, Byrne M, Cantin NE, Comeau S, Connolly SR, Cumming GS, Dalton SJ, Diaz-Pulido G, Eakin CM, Figueira WF, Gilmour JP, Harrison HB, Heron SF, Hoey AS, Hobbs J-PA, Hoogenboom MO, Kennedy EV, Kuo C-Y, Lough JM, Lowe RJ, Liu G, McCulloch MT, Malcolm HA, McWilliam MJ, Pandolfi JM, Pears RJ, Pratchett MS, Schoepf V, Simpson T, Skirving WJ, Sommer B, Torda G, Wachenfeld DR, Willis BL, Wilson SK Global warming and recurrent mass bleaching of corals Nature 543 373-377, 2017
DOI:10.1038/nature21707
View abstract
During 2015–2016, record temperatures triggered a pan-tropical episode of coral bleaching, the third global-scale event since mass bleaching was first documented in the 1980s. Here we examine how and why the severity of recurrent major bleaching events has varied at multiple scales, using aerial and underwater surveys of Australian reefs combined with satellite-derived sea surface temperatures. The distinctive geographic footprints of recurrent bleaching on the Great Barrier Reef in 1998, 2002 and 2016 were determined by the spatial pattern of sea temperatures in each year. Water quality and fishing pressure had minimal effect on the unprecedented bleaching in 2016, suggesting that local protection of reefs affords little or no resistance to extreme heat. Similarly, past exposure to bleaching in 1998 and 2002 did not lessen the severity of bleaching in 2016. Consequently, immediate global actionto curb future warming is essential to secure a future for coral reefs.
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Chauvenet ALM, Kuempel CD, McGowan J, Beger M, Possingham HP Methods for calculating Protection Equality for conservation planning PLoS ONE 12, 2017
DOI:10.1371/journal.pone.0171591
View abstract
© 2017 Chauvenet et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Protected Areas (PAs) are a central part of biodiversity conservation strategies around the world. Today, PAs cover c15% of the Earth's land mass and c3% of the global oceans. These numbers are expected to grow rapidly to meet the Convention on Biological Diversity's Aichi Biodiversity target 11, which aims to see 17% and 10% of terrestrial and marine biomes protected, respectively, by 2020. This target also requires countries to ensure that PAs protect an "ecologically representative" sample of their biodiversity. At present, there is no clear definition of what desirable ecological representation looks like, or guidelines of howto standardize its assessment as the PA estate grows. We propose a systematic approach to measure ecological representation in PA networks using the Protection Equality (PE) metric, which measures how equally ecological features, such as habitats, within a country's borders are protected. We presentan R package and two Protection Equality (PE) measures; proportional to area PE, and fixed area PE, which measure the representativeness of a country's PA network. We illustrate the PE metrics with two case studies: coral reef protection across countries and ecoregions in the Coral Triangle, and representation of ecoregions of six of the largest countries in the world. Our results provide repeatable transparency to the issue of representation in PA networks and provide a starting point for further discussion, evaluation and testing of representation metrics. They also highlight clear shortcomings in current PA networks, particularly where they are biased towards certain assemblage types or habitats. Our proposed metrics should be used to report on measuring progress towards the representation component of Aichi Target 11. The PE metrics can be used to measure the representation of anykind of ecological feature including: species, ecoregions, processes or habitats.
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Baldwin C, Lewison RL, Lieske SN, Beger M, Hines E, Dearden P, Rudd MA, Jones C, Satumanatpan S, Junchompoo C Using the DPSIR framework for transdisciplinary training and knowledge elicitation in the Gulf of Thailand Ocean and Coastal Management 134 163-172, 2016
DOI:10.1016/j.ocecoaman.2016.09.005
Roelfsema C, Thurstan R, Beger M, Dudgeon C, Loder J, Kovacs E, Gallo M, Flower J, Cabrera KLG, Ortiz J, Lea A, Kleine D A citizen science approach: A detailed ecological assessment of subtropical reefs at point lookout, Australia PLoS ONE 11, 2016
DOI:10.1371/journal.pone.0163407
View abstract
Subtropical reefs provide an important habitat for flora and fauna, and proper monitoring is required for conservation. Monitoring these exposed and submerged reefs is challenging and available resources are limited. Citizen science is increasing in momentum, as an applied research tool and in the variety of monitoring approaches adopted. This paper aims to demonstrate an ecological assessment and mapping approach that incorporates both top-down (volunteer marine scientists) and bottom-up (divers/community) engagement aspects of citizen science, applied at a subtropical reef at Point Lookout, Southeast Queensland, Australia. Marine scientists trained fifty citizen scientists in survey techniques that included mapping of habitat features, recording of substrate, fish and invertebrate composition, and quantifying impacts (e.g., occurrence of substrate damage, presence of litter). In 2014 these volunteers conducted four seasonal surveys along semi-permanent transects, at five sites, across three reefs. The project presented is a model on how citizen science can be conducted in a marine environment through collaboration of volunteer researchers, non-researchers and local marine authorities. Significant differences in coral and algal cover were observed among the three sites, while fluctuations in algal cover were also observed seasonally. Differences in fish assemblages were apparent among sites and seasons, with subtropical fish groups observed more commonly in colder seasons. The least physical damage occurred in the most exposed sites (Flat Rock) within the highly protected marine park zones. The broad range of data collected through this top-down/bottomup approach to citizen science exemplifies the projects' value and application for identifying ecosystem trends or patterns. The results of the project support natural resource and marine park management, providing a valuable contribution to existing scientific knowledge and the conservation of local reefs.
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Cinner JE, Huchery C, MacNeil MA, Graham NAJ, McClanahan TR, Maina J, Maire E, Kittinger JN, Hicks CC, Mora C, Allison EH, D'Agata S, Hoey A, Feary DA, Crowder L, Williams ID, Kulbicki M, Vigliola L, Wantiez L, Edgar G, Stuart-Smith RD, Sandin SA, Green AL, Hardt MJ, Beger M, Friedlander A, Campbell SJ, Holmes KE, Wilson SK, Brokovich E, Brooks AJ, Cruz-Motta JJ, Booth DJ, Chabanet P, Gough C, Tupper M, Ferse SCA, Sumaila UR, Mouillot D Bright spots among the world's coral reefs Nature 535 416-419, 2016
DOI:10.1038/nature18607
View abstract
© 2016 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. Ongoing declines in the structure and function of the world's coral reefs require novel approaches to sustain these ecosystems and the millions of people who depend on them. A presently unexplored approach that drawson theory and practice in human health and rural development is to systematically identify and learn from the 'outliers' - places where ecosystems are substantially better ('bright spots') or worse ('dark spots') than expected, given the environmental conditions and socioeconomic drivers they are exposed to. Here we compile data from more than 2,500 reefs worldwide and develop a Bayesian hierarchical model to generate expectations of how standing stocks of reef fish biomass are related to 18 socioeconomic drivers and environmental conditions. We identify 15 bright spots and 35 dark spots among our global survey of coral reefs, defined as sites that have biomass levels more than two standard deviations from expectations. Importantly, bright spots are not simply comprised of remote areas with low fishing pressure; they include localities where human populations and use of ecosystem resources is high, potentially providing insights into how communities have successfully confronted strong drivers of change. Conversely, dark spots are not necessarily the sites with the lowest absolute biomass and even include some remote, uninhabited locations often considered near pristine. We surveyed local experts about social, institutional, and environmental conditions at these sites to reveal that bright spots are characterized by strong sociocultural institutions such as customary taboos and marine tenure, high levels of local engagement in management, high dependence on marine resources,and beneficial environmental conditions such as deep-water refuges. Alternatively, dark spots are characterized by intensive capture and storage technology and a recent history of environmental shocks. Our results suggest that investments in strengthening fisheries governance, particularly aspects such as participation and property rights, could facilitate innovative conservation actions that help communities defy expectations of global reef degradation.
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Boon PY, Beger M The effect of contrasting threat mitigation objectives on spatial conservation priorities Marine Policy 68 23-29, 2016
DOI:10.1016/j.marpol.2016.02.010
View abstract
© 2016.The primary role of marine protected areas (MPAs) is marine conservation, however policy and practice around MPAs have not reflected this. The focus on cost-effectiveness by spatial conservation prioritization has led to a bias towards placing MPAs in areas that are least threatened. This study investigates how conservation priorities differ between two management strategies of either targeting or avoiding high threat areas for protection, using the case of the Sulu Sulawesi Seas in the Coral Triangle. For both strategies, the target of protecting 20% of habitat could not be achieved solely by protecting low threat areas. A high proportion of the region had large differences in conservation outcomes between the two strategies; majority of these areas were highly prioritized in the threat avoidance strategy but had low or zero importance in the threat selection strategy. Selecting for highly threatened areas required less habitat area to be protected to achieve the same conservation target and resulted in a more equitable distribution of priority sites per country and sub-region. This demonstrates the importance of deciding on the objectives of conservation and management policies up-front. The results suggest that, contrary to the common practice of avoiding threats in spatial planning, a threat selection strategy should be part of the management toolbox, particularly in transboundary planning for regions with high overall threat levels, where it may be important to achieve shared conservation targets equitably.
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Mazor T, Beger M, Mcgowan J, Possingham HP, Kark S The value of migration information for conservation prioritization of sea turtles in the Mediterranean Global Ecology and Biogeography 25 540-552, 2016
DOI:10.1111/geb.12434
View abstract
Aim: Conservation plans often struggle to account for connectivity in spatial prioritization approaches for the protection of migratory species. Protection of such species is challenging because their movements may be uncertain and variable, span vast distances, cross international borders and traverse land and sea habitats. Often we are faced with small samples of information from various sources and the collection of additional data can be costly and time-consuming. Therefore it is important to evaluate what degree of spatial information provides sufficient results for directing management actions. Here we develop and evaluate an approach that incorporates habitat and movement information to advance the conservation of migratory species. We test our approach using information on threatened loggerhead sea turtles (Caretta caretta) in the Mediterranean. Location: The Mediterranean Sea. Methods: We use Marxan, a spatially explicit decision support tool, to select priority conservation areas. Four approaches with increasing amounts of information about the loggerhead sea turtle are compared, ranging from (1) the broad distribution, (2) multiple habitat types that represent foraging, nesting and inter-nesting habitats, (3) mark-recapture movement information to (4) telemetry-derived migration tracks. Results: We find that spatial priorities for sea turtle conservation are sensitive to the information used in the prioritization process. Setting conservation targets for migration tracks altered the location of conservation priorities, indicating that conservation plans designed without such data would miss important sea turtle habitat. We discover that even a small number of tracks make a significant contribution to a spatial conservation plan if those tracks are substantially different. Main conclusions: This study presents a novel approach to improving spatial prioritization for conserving migratory species. We propose that future telemetry studies tailor their efforts towards conservation prioritization needs, meaning that spatially dispersed samples rather than just large numbers should be obtained. This work highlights the valuable information that telemetry research contributes to the conservation of migratory species.
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Hunter M, Westgate M, Barton P, Calhoun A, Pierson J, Tulloch A, Beger M, Branquinho C, Caro T, Gross J, Heino J, Lane P, Longo C, Martin K, McDowell WH, Mellin C, Salo H, Lindenmayer D Two roles for ecological surrogacy: Indicator surrogates and management surrogates Ecological Indicators 63 121-125, 2016
DOI:10.1016/j.ecolind.2015.11.049
View abstract
© 2015 Elsevier Ltd. All rights reserved.Ecological surrogacy - here defined as using a process or element (e.g., species, ecosystem, or abiotic factor) to represent another aspect of an ecological system - is a widely used concept, but many applications of the surrogate concept have been controversial. We argue that some of this controversy reflects differences among users with different goals, a distinction that can be crystalized by recognizing two basic types of surrogate. First, many ecologists and natural resource managers measure "indicator surrogates" to provide information about ecological systems. Second, and often overlooked, are "management surrogates" (e.g., umbrella species) that are primarily used to facilitate achieving management goals, especially broad goals such as "maintain biodiversity" or "increase ecosystem resilience." We propose that distinguishing these two overarching roles for surrogacy may facilitate better communication about project goals. This is critical when evaluating the usefulness of different surrogates, especially where a potential surrogate might be useful in one role but not another. Our classification for ecological surrogacy applies to species, ecosystems, ecological processes, abiotic factors, and genetics, and thus can provide coherence across a broad range of uses.
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Lewison RL, Rudd MA, Al-Hayek W, Baldwin C, Beger M, Lieske SN, Jones C, Satumanatpan S, Junchompoo C, Hines E How the DPSIR framework can be used for structuring problems and facilitating empirical research in coastal systems Environmental Science and Policy 56 110-119, 2016
DOI:10.1016/j.envsci.2015.11.001
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© 2015 Elsevier Ltd. As pressures on coastal zones mount, there is a growing need for frameworks that can be used to conceptualize complex sustainability challenges and help organize research that increases understand about interacting ecological and societal processes, predicts change, and supports the management, persistence, and resilience of coastal systems. The Driver-Pressure-State-Impact-Response (DPSIR) framework is one such approach that has been adopted in some coastal zones around the world. Although the application of the DPSIR framework has considerable potential to bridge the gap between scientific disciplines and link science to coastal policy and management, current applications of DPSIR in coastal environments have been limited and new innovations in the application of the DPSIR model are needed. We conducted a structured review of literature on the DPSIR framework as applied to the function, process and components of complex coastal systems. Our specific focus was on how the DPSIR framework has been used as a tool to organize sophisticated empirical scientific research, support transdisciplinary knowledge at a level appropriate for building understanding about coastal systems, and how adopting a DPSIR approach can help stakeholders to articulate and structure challenges in coastal systems and use the framework to support policy and management outcomes. The review revealed that DPSIR models of coastal systems have been largely used to support and develop conceptual understanding of coastal social-ecological systems and to identify drivers and pressures in the coastal realm. A limited number of studies have used DPSIR as a starting point for semi-quantitative or quantitative analyses, although our review highlights the continued need for, and potentialof, transformative quantitative analyses and transdisciplinary applications of the DPSIR framework. The DPSIR models we reviewed were predominantly single sector, encompassing ecological or biophysical factors or focusing primarily on socio-cultural dimensions rather than full integration of both types of information. Only in eight of 24 shortlisted articles did researchers actively engage decision-makers or citizens in their research: given the potential opportunity for using DPSIR as a tool to successfully engage policy-makers and stakeholders, it appears that the DPSIR framework has been under-utilized in this regard.
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Lindenmayer D, Pierson J, Barton P, Beger M, Branquinho C, Calhoun A, Caro T, Greig H, Gross J, Heino J, Hunter M, Lane P, Longo C, Martin K, McDowell WH, Mellin C, Salo H, Tulloch A, Westgate M A new framework for selecting environmental surrogates Science of the Total Environment 538 1029-1038, 2015
DOI:10.1016/j.scitotenv.2015.08.056
View abstract
© 2015 Elsevier B.V. Surrogate concepts are used in all sub-disciplines of environmental science. However, controversy remains regarding the extent to which surrogates are useful for resolving environmental problems. Here, we argue that conflicts about the utility of surrogates (and the related concepts of indicators and proxies) often reflect context-specific differences in trade-offs betweenmeasurement accuracy and practical constraints. By examining different approaches for selecting and applying surrogates, we identify five trade-offs that correspond to key points of contention in the application of surrogates.We then present an 8-step Adaptive Surrogacy Framework that incorporates cross-disciplinary perspectives froma wide spectrumof the environmental sciences, aiming to unify surrogate concepts across disciplines and applications. Our synthesis of the science of surrogates is intended as a first step towards fully leveraging knowledge accumulated across disciplines, thus consolidating lessons learned so that they may be accessible to all those operating in different fields, yet facing similar hurdles.
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Klein CJ, Brown CJ, Halpern BS, Segan DB, McGowan J, Beger M, Watson JEM Shortfalls in the global protected area network at representing marine biodiversity Scientific Reports 5, 2015
DOI:10.1038/srep17539
View abstract
The first international goal for establishing marine protected areas (MPAs) to conserve the ocean's biodiversity was set in 2002. Since 2006, the Convention on Biological Diversity (CBD) has driven MPA establishment, with 193 parties committed to protecting>10% of marine environments globally by 2020, especially 'areas of particular importance for biodiversity' (Aichi target 11). This has resulted in nearly 10 million km 2 of new MPAs, a growth of∼360% in a decade. Unlike on land, it is not known how well protected areas capture marine biodiversity, leaving a significant gap in our understanding of existing MPAs and future protection requirements. We assess the overlap of global MPAs with the ranges of 17,348 marine species (fishes, mammals, invertebrates), and find that 97.4% of species have<10% of their ranges represented in stricter conservation classes. Almost all (99.8%) of the very poorly represented species (<2% coverage) are found within exclusive economic zones, suggesting an important role for particular nations to better protect biodiversity. Our results offer strategic guidance on where MPAs should be placed to support the CBD's overall goal to avert biodiversity loss. Achieving this goal is imperative for nature and humanity, as people depend on biodiversity for important and valuable services.
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Peirson W, Davey E, Jones A, Hadwen W, Bishop K, Beger M, Capon S, Fairweather P, Creese B, Smith TF, Gray L, Tomlinson R Opportunistic management of estuaries under climate change: A new adaptive decision-making framework and its practical application Journal of Environmental Management 163 214-223, 2015
DOI:10.1016/j.jenvman.2015.08.021
View abstract
© 2015 Elsevier Ltd. Ongoing coastal development and the prospect of severe climate change impacts present pressing estuary management and governance challenges. Robust approaches must recognise the intertwined social and ecological vulnerabilities of estuaries. Here, a new governance and management framework is proposed that recognises the integrated social-ecological systems of estuaries so as to permit transformative adaptation to climate change within these systems. The framework lists stakeholders and identifies estuarine uses and values. Goals are categorised that are specific to ecosystems, private property, public infrastructure, and human communities. Systematic adaptation management strategies are proposed with conceptual examples and associated governance approaches. Contrasting case studies are used to illustrate the practical application of these ideas. The framework will assist estuary managers worldwide to achieve their goals, minimise maladaptative responses, better identify competing interests, reduce stakeholder conflict and exploit opportunities for appropriate ecosystem restoration and sustainable development.
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Brown CJ, White C, Beger M, Grantham HS, Halpern BS, Klein CJ, Mumby PJ, Tulloch VJD, Ruckelshaus M, Possingham HP Fisheries and biodiversity benefits of using static versus dynamic models for designing marine reserve networks Ecosphere 6, 2015
DOI:10.1890/ES14-00429.1
View abstract
© 2015 Brown et al. Marine reserves are widely used to manage for the potentially conflicting objectives of conserving biodiversity and improving fisheries. The fisheries and conservation benefits of alternative reserve designs would ideally be assessed using dynamic models, which consider spillover of fish and larvae to fished areas, and the displacement of fishers to unprotected sites. In practice, however, decisions about the location of marine reserves generally rely on cheaper and faster static models. Static models analyze only spatial patterns in habitats, and typically assume fisheries profits are reduced by the amount that was generated in areas designated as reserves. To help determine the benefits of developing dynamic fisheries models, we assessed how well static models estimate costs of reserve systems to fisheries and how outcomes from reserves designed using either staticor dynamic models differ. We tested these questions in two case studies, the network of marine protected areas in southern California, USA and the proposed Tun Mustapha Marine Park in Malaysia. Static models could either under or over-estimate the cost of reserve plans to fisheries, depending on the relative importance of fisher movement and larval dispersal dynamics. Despite the inaccuracy of static models for estimating costs, reserves designed using static models were similar to those designed with dynamic models if fisheries were well managed; or larval dispersal networks were simple. Iflarval networks were complex or there was overfishing, dynamic models generated substantially different reserve networks from static models, which improved conservation outcomes by up to 10% and fishing profits by up 20%. The time-scale of management was also important, because only dynamic models accounted for larval dispersal, so could find reserves that maximized the long-term benefits of larval spillover. Our case studies provide quantitative support for the assertion that static models can be useful for planning marine reserves for short-term objectives in well managed fisheries, but arenot reliable for evaluating the relative costs of reserves to fisheries. Copyright:
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Beger M, McGowan J, Treml EA, Green AL, White AT, Wolff NH, Klein CJ, Mumby PJ, Possingham HP Integrating regional conservation priorities for multiple objectives into national policy Nature Communications 6, 2015
DOI:10.1038/ncomms9208
View abstract
© Macmillan Publishers Limited. All rights reserved. Multinational conservation initiatives that prioritize investment across a region invariably navigate trade-offs among multiple objectives. It seems logical to focus where several objectives can be achieved efficiently, but such multi-objective hotspots may be ecologically inappropriate, or politically inequitable. Here we devise a framework to facilitate a regionally cohesive set of marine-protected areas driven by national preferences and supported by quantitative conservation prioritization analyses, and illustrate it using the Coral Triangle Initiative. We identify areas important for achieving six objectives to address ecosystem representation, threatened fauna, connectivity and climate change. We expose trade-offs between areas that contribute substantially to several objectives and those meeting one or two objectives extremelywell. Hence there are two strategies to guide countries choosing to implement regional goals nationally: multi-objective hotspots and complementary sets of single-objective priorities. This novel framework is applicable to any multilateral or global initiative seeking to apply quantitative information in decision making.
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Tulloch VJD, Tulloch AIT, Visconti P, Halpern BS, Watson JEM, Evans MC, Auerbach NA, Barnes M, Beger M, Chadès I, Giakoumi S, McDonald-Madden E, Murray NJ, Ringma J, Possingham HP Why do We map threats? Linking threat mapping with actions to make better conservation decisions Frontiers in Ecology and the Environment 13 91-99, 2015
DOI:10.1890/140022
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© The Ecological Society of America. Spatial representations of threatening processes - "threat maps" - can identify where biodiversity is at risk, and are often used to identify priority locations for conservation. In doing so, decision makers are prone to making errors, either by assuming that the level of threat dictates spatial priorities for action or by relying primarily on the location of mapped threats to choose possible actions. We show that threat mapping can be a useful tool when incorporated within a transparent and repeatable structured decision-making (SDM) process. SDM ensurestransparent and defendable conservation decisions by linking objectives to biodiversity outcomes, and by considering constraints, consequences of actions, and uncertainty. If used to make conservation decisions, threat maps are best developed with an understanding of how species respond to actions that mitigate threats. This approach will ensure that conservation actions are prioritized where they are most cost-effective or have the greatest impact, rather than where threat levels are highest.
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Simpson CJ, Beger M, Colman JG, Friedman KJ, Hill AK, Kendrick AJ, Waples KA, Whiting SD, Wilson SK Prioritisation of conservation research and monitoring for Western Australian protected areas and threatened species Conservation Science Western Australia 9 227-237, 2015
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© The Government of Western Australia, 2015. Prioritisation of natural assets for monitoring and research activities facilitates equitable allocation of finite conservation resources. We present a framework that identifies broad monitoring and research priorities for conservation areas, such as marine parks, and threatened species. Criteria within the framework are used to assess: the value (V) of assets; anthropogenic pressures (P) that affect assets; and the current state of asset knowledge (K). A panel of experts score criteria and the relative importance of each asset is calculated for monitoring (V * P), fundamental research (V * K) and applied research (V * P * K). The framework allows prioritisation of assets in an initial evaluation that agrees with institutional mandates, and facilitates future assessment of the feasibility and cost of monitoring or research in the implementation phase. The utility of the framework is that it can be easily applied by conservation practitioners and can concurrently prioritise monitoring and research of species, habitats and communities in marine and terrestrial environments.
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Makino A, Klein CJ, Possingham HP, Yamano H, Yara Y, Ariga T, Matsuhasi K, Beger M The Effect of Applying Alternate IPCC Climate Scenarios to Marine Reserve Design for Range Changing Species Conservation Letters 8 320-328, 2015
DOI:10.1111/conl.12147
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© 2015 Wiley Periodicals, Inc. Effectively protecting of biodiversity in the future relies on reserves that accommodate potential climate change impacts. Climate predictions are based on plausible ranges of greenhouse gas concentration scenarios from the IPCC, called Representative Concentration Pathways (RCPs). It is unknown how different scenarios influence spatial prioritization, particularly for species that change their range due to climate change. Using corals in Japan, we explore differences in priorities under three RCPs (RCP8.5, 4.5, and 2.6), comparing three time frames (current conditions, near future, and distant future). We targeted three temperature zones representing different coral community types, determined from predictions of sea-surface temperature for three RCPs. Results showed that using one RCP prediction to design a reserve system does a poor job at meeting conservation targets for other RCPs, missing up to 100% of the targets. We emphasize the importance of focusing conservation investment in "no regrets" areas that are important under every RCP.
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Tallis H, Lubchenco J Working together: A call for inclusive conservation Nature 515 27-28, 2014
Sommer B, Harrison PL, Beger M, Pandolfi JM Trait-mediated environmental filtering drives assembly at biogeographic transition zones ECOLOGY 95 1000-1009, 2014
DOI:10.1890/13-1445.1
Ceccarelli DM, Frisch AJ, Graham NAJ, Ayling AM, Beger M Habitat partitioning and vulnerability of sharks in the Great Barrier Reef Marine Park Reviews in Fish Biology and Fisheries 24 169-197, 2014
DOI:10.1007/s11160-013-9324-8
View abstract
Sharks present a critical conservation challenge, but little is known about their spatial distribution and vulnerability, particularly in complex seascapes such as Australia's Great Barrier Reef Marine Park (GBRMP). We review (1) the distribution of shark species among the primary habitats of the GBRMP (coral reefs, inshore/shelf, pelagic and deep-water habitats) (2) the relative exploitation of each species by fisheries, and (3) how current catch rates interact with their vulnerability and trophic index. Excluding rays and chimaeras, we identify a total of 82 shark species in the GBRMP. We find that shark research in the GBRMP has yielded little quantitative information on most species. Reef sharks are largely site-fidelic, but can move large distances and some regularly use non-reef habitats. Inshore and shelf sharks use coastal habitats either exclusively or during specific times in their life cycle (e.g. as nurseries). Virtually nothing is known about the distribution and habitat use of the GBRMP's pelagic and deep-water sharks. At least 46 species (53.5 %) are caught in one or more fisheries, but stock assessments are lacking for most. At least 17 of the sharks caught are considered highly vulnerable to exploitation. We argue that users of shark resources should be responsible for demonstrating that a fishery is sustainable before exploitation is allowed to commence or continue. This fundamental change in management principle will safeguard against stock collapses that have characterised many shark fisheries.© 2013 Springer Science+Business Media Dordrecht.
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Beger M, Sommer B, Harrison PL, Smith SDA, Pandolfi JM Conserving potential coral reef refuges at high latitudes Diversity and Distributions 20 245-257, 2014
DOI:10.1111/ddi.12140
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Aim: High-latitude coral reef communities composed of tropical, subtropical and temperate species are heralded as climate change refuges for vulnerable tropical coral reef species, giving them high, but as yet unrealized, conservation priority. We review the ecology of subtropical reefs in the context of climate change and evaluate management strategies ensuring both their own continuity and their potential to act as refuges for tropical species. Location: Global high-latitude coral reef environments. Methods: We review the literature about refuges management, high-latitude reefs, climate change effects on reef organisms and the conservation of reefs. Results: High-latitude coral reef systems are functionally different from their tropical counterparts, characterized by unique biogeographical overlap of taxa at their range margins, endemic species and strong seasonality in species composition. They are shaped by marginal environmental conditions, which are predicted to undergo greater changes than reefs at lower latitudes, resulting in community re-assembly through range shifts, altered dispersal patterns, survivorship and habitat loss. The combined impact of these changes, however, is difficult to assess, as some effects may be antagonistic. Climate change conservation options include passive management strategies such as no-take reserves that aim to minimize local disturbances, and active strategies such as relocating populations to refuge sites. Success of active intervention relies on the long-term persistence of relocated populations, which is unlikely for high-latitude populations once source tropical populations at lower latitudes are locally extinct. Main conclusion: High-latitude reefs are poised for rapid modification under climate change. Management should anticipate these changes by setting up no-take reserves on suitable subtropical reefs now to foster ecosystem resilience through reduced anthropogenic impacts. Given the uncertainty over which species will arrive or depart and lack of knowledge about the history of most subtropical reef development, active management is presently not the best use of management resources.© 2013 John Wiley&Sons Ltd.
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Makino A, Yamano H, Beger M, Klein CJ, Yara Y, Possingham HP Spatio-temporal marine conservation planning to support high-latitude coral range expansion under climate change Diversity and Distributions 20 859-871, 2014
DOI:10.1111/ddi.12184
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Aim: Increasing sea-surface temperatures (SST) have resulted in poleward range expansions of scleractinian corals and declines in their core ranges. These changes may provide management opportunities for the long-term persistence of corals, but spatial prioritization rarely considers and anticipates these changes. We developed a spatio-temporal conservation plan that accommodates future coral range expansions based on projections of future SST. Our spatial planning approach is particularly useful in places with limited information about species distributions. Our aims were to (1) identify areas that consistently remain important for conservation through time and (2) determine the differences between priorities for conservation that account for potential coral range expansions and those that ignore them. Location: Japan. Methods: We developed spatial planning approaches using predicted coral habitat distributions for current conditions, the near future and the distant future. Using the Marxan conservation planning software, we designed conservation plans for scenarios that incorporated different types of spatial and temporal connections. Spatial connections are physical connections between adjacent and nearby areas, whereas temporal connections connect planning areas throughout time. Results: We found that protecting areas important for current and future coral habitat distributions is possible by prioritizing places that are consistently important through time. A spatially and temporally cohesive plan was accomplished with only a 14% increase in the overall reserve system costs, compared with reserve systems ignoring future coral habitat distributions. The attributes of priority areas (e.g. locations, outside boundary length and size) were substantially different when we varied the types of connections. Main conclusions: This study demonstrated that areas with highest conservation priority now will not necessarily be optimal when planning for future change, such as coral range expansions. Furthermore, we showed that incorporating spatio-temporal connections into spatial prioritization achieves objectives of simultaneously conserving corals in the current climate and facilitating their expansions as SST rises.© 2014 John Wiley&Sons Ltd.
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Beger M, Selkoe KA, Treml E, Barber PH, Von Der Heyden S, Crandall ED, Toonen RJ, Riginos C Evolving coral reef conservation with genetic information Bulletin of Marine Science 90 159-185, 2014
DOI:10.5343/bms.2012.1106
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Targeted conservation and management programs are crucial for mitigating anthropogenic threats to declining biodiversity. Although evolutionary processes underpin extant patterns of biodiversity, it is uncommon for resource managers to explicitly consider genetic data in conservation prioritization. Genetic information is inherently relevant to management because it describes genetic diversity, population connectedness, and evolutionary history; thereby typifying their behavioral traits, physiological climate tolerance, evolutionary potential, and dispersal ability. Incorporating genetic information into spatial conservation prioritization starts with reconciling the terminology and techniques used in genetics and conservation science. Genetic data vary widely in analyses and their interpretations can be challenging even for experienced geneticists. Therefore, identifying objectives, decision rules, and implementations in decision support tools specifically for management using genetic data is challenging. Here, we outline a framework for eight genetic system characteristics, their measurement, and how they could be incorporated in spatial conservation prioritization for two contrasting objectives: biodiversity preservation vs maintaining ecological function and sustainable use. We illustrate this framework with an example using data from Tridacna crocea (Lamarck, 1819) (boring giant clam) in the Coral Triangle. We find that many reefs highlighted as conservation priorities with genetic data based on genetic subregions, genetic diversity, genetic distinctness, and connectivity are not prioritized using standard practices. Moreover, different characteristics calculated from the same samples resulted in different spatial conservation priorities. Our results highlight that omitting genetic information from conservation decisions may fail to adequately represent processes regulating biodiversity, but that conservation objectives related to the choice of genetic system characteristics require careful consideration.© 2014 Rosenstiel School of Marine and Atmospheric Science of the University of Miami.
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Von Der Heyden S, Beger M, Toonen RJ, Van Herwerden L, Juinio-Meñez MA, Ravago-Gotanco R, Fauvelot C, Bernardi G The application of genetics to marine management and conservation: Examples from the Indo-Pacific Bulletin of Marine Science 90 123-158, 2014
DOI:10.5343/bms.2012.1079
View abstract
Molecular tools and analyses have played pivotal roles in uncovering the processes and patterns of biodiversity in the Indian and Pacific oceans. However, integrating genetic results into management and conservation objectives has been challenging, with few examples that show practical applicability. This review aims to address some of the perceived barriers to an enhanced approach that integrates molecular data into management and conservation goals, by reviewing papers relevant to both conservation and fisheries management in the Indo-Pacific region, particularly with respect to phylogeography, connectivity, and species identification, as well as stock delineation, restoration of depleted wild stocks, mislabeled marine resources and "molecular forensics." We also highlight case studies from each of these areas that illustrate how molecular analyses are relevant to conservation and management in the Indo- Pacific, spanning a variety of vertebrate and invertebrate species. We discuss the application of genetic data to the design and evaluation of the effectiveness of marine protected area networks, stock delineation, and restoration and the usage of exclusion tests and parentage analyses for fisheries management. We conclude that there is a distinct need for increasing public awareness and ownership of genetically unique lineages and, ultimately, the increased inclusion of genetic research into management policy and conservation. Finally, we make a case for the importance of clear and effective communication for promoting public awareness, public ownership, and for achieving conservation goals within the region.© 2014 Rosenstiel School of Marine and Atmospheric Science of the University of Miami.
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Hobbs JPA, Beger M, De Brauwer M, Emslie MJ North-eastern range extension of the anemone Stichodactyla haddoni to the Marshall Islands represents a new record of host use by the endemic anemonefish Amphiprion tricinctus Marine Biodiversity Records 7, 2014
DOI:10.1017/S1755267214001055
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© Marine Biological Association of the United Kingdom 2014. Amphiprion tricinctus is an anemonefish endemic to the Marshall Islands that was previously reported to inhabit four species of sea anemone. Underwater visual surveys in 2009 and 2010 located five individuals of the anemone Stichodactyla haddoni in the shallow lagoon of Majuro Atoll. This is the first record of S. haddoni in the Marshall Islands and a significant north-eastern range extension by 2200 km from its nearest record in Chuuk State, Federated States of Micronesia. Stichodactyla haddoni was inhabited by juvenile and adult A.tricinctus. This report is the first to describe a symbiotic relationship between A tricinctus and S. haddoni. The number of host anemone species inhabited by A. tricinctus now extends to five.
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Makino A, Klein CJ, Beger M, Jupiter SD, Possingham HP Incorporating conservation zone effectiveness for protecting biodiversity in marine planning PLoS ONE 8, 2013
DOI:10.1371/journal.pone.0078986
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Establishing different types of conservation zones is becoming commonplace. However, spatial prioritization methods that can accommodate multiple zones are poorly understood in theory and application. It is typically assumed that management regulations across zones have differential levels of effectiveness ("zone effectiveness") for biodiversity protection, but the influence of zone effectiveness on achieving conservation targets has not yet been explored. Here, we consider the zone effectiveness of three zones: permanent closure, partial protection, and open, for planning for the protection of five different marine habitats in the Vatu-i-Ra Seascape, Fiji. We explore the impact of differential zone effectiveness on the location and costs of conservation priorities. We assume that permanent closure zones are fully effective at protecting all habitats, open zones do not contribute towards the conservation targets and partial protection zones lie between these two extremes. We use four different estimates for zone effectiveness and three different estimates for zone cost of the partial protection zone. To enhance the practical utility of the approach, we also explore how much of each traditional fishing ground can remain open for fishing while still achieving conservation targets. Our results show that all of the high priority areas for permanent closure zones would not be a high priority when the zone effectiveness of the partial protection zone is equal to that of permanent closure zones. When differential zone effectiveness and costs are considered, the resulting marine protected area network consequently increases in size, with more area allocated to permanent closure zones to meet conservation targets. By distributing the loss of fishing opportunity equitably among local communities, we find that 84-88% of each traditional fishing ground can be left open while still meeting conservation targets. Finally, we summarize the steps for developing marine zoning that accounts for zone effectiveness.© 2013 Makino et al.
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Richards Z, Beger M Regional conservation status of scleractinian coral biodiversity in the republic of the marshall islands Diversity 5 522-540, 2013
DOI:10.3390/d5030522
View abstract
Preventing the loss of biodiversity is a major challenge in mega-diverse ecosystems such as coral reefs where there is a critical shortage of baseline demographic data. Threatened species assessments play a valuable role in guiding conservation action to manage and mitigate biodiversity loss, but they must be undertaken with precise information at an appropriate spatial scale to provide accurate classifications. Here we explore the regional conservation status of scleractinian corals on isolated Pacific Ocean atolls in the Republic of the Marshall Islands. We compile an integrated regional species list based upon new and historical records, and compare how well the regional threat classifications reflect species level priorities at a global scale. A similar proportion of the 240 species of hard coral recorded in the current survey are classified as Vulnerable at the regional scale as the global scale using the International Union for the Conservation of Nature (IUCN) Red List criteria (23% and 20% respectively), however there are distinct differences in the composition of species. When local abundance data is taken into account, a far greater proportion of the regional diversity (up to 80%) may face an elevated risk of local extinction. These results suggest coral communities on isolated Pacific coral reefs, which are often predicted to be at low risk, are still vulnerable due to the small and fragmented nature of their populations. This reinforces that to adequately protect biodiversity, ongoing threatened species monitoring and the documentation of species-level changes in abundance and distribution is imperative.© 2013 by the authors; licensee MDPI, Basel, Switzerland.
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Lukoschek V, Beger M, Ceccarelli D, Richards Z, Pratchett M Enigmatic declines of Australia's sea snakes from a biodiversity hotspot Biological Conservation 166 191-202, 2013
DOI:10.1016/j.biocon.2013.07.004
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Declines in the abundance of marine vertebrates are of considerable concern, especially when they occur in isolated locations relatively protected from most major anthropogenic disturbances. This paper reports on sustained declines in the abundance and diversity of sea snakes at Ashmore Reef, a renowned biodiversity hotspot in Australia's Timor Sea. Surveys conducted in eight years between 1973 and 2010 recorded the highest abundances (average 42-46 snakes day -1 ) and species richness (nine species) in 1973 and 1994. In 2002 abundance had declined by more than 50% (21 snakes day -1 ) and only five species were recorded. Since 2005 abundances have been consistently low (1-7 snakes day -1 ), with just two species, Aipysurus laevis andEmydocephalus annulatus, recorded in significant numbers. Despite extensive searches since 2005 (especially in 2010) five species of sea snake historically abundant at Ashmore Reef have not been sighted and are presumed to have become locally extinct. These species include three Timor Sea endemics Aipysurus apraefrontalis, Aipysurus foliosquama, Aipysurus fuscus, and one Australasian endemic Aipysurus duboisii. Declines in the abundance and diversity of sea snakes at Ashmore Reef cannot be attributed to differences in survey methods among years. Ashmore Reef was declared a National Nature Reserve (IUCN Category 1a) in 1983 and, although the causes for the declines are not known, this protection has not prevented their occurrence. We discuss possible causes for these enigmatic declines however, in order to implement effective management strategies, studies are needed to determine why sea snakes have disappeared from Ashmore Reef.© 2013 Elsevier Ltd.
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Makino A, Beger M, Klein CJ, Jupiter SD, Possingham HP Integrated planning for land-sea ecosystem connectivity to protect coral reefs Biological Conservation 165 35-42, 2013
DOI:10.1016/j.biocon.2013.05.027
View abstract
Coral reefs are threatened by human activities both on the land and in the sea. However, standard approaches for prioritizing locations for marine and terrestrial reserves neglect to consider connections between ecosystems. We demonstrate an integrated approach for coral reef conservation with the objective of prioritizing marine reserves close to catchments with high forest cover in order to facilitate ecological processes that rely upon intact land-sea protected area connections and minimize negative impact of land-based runoff on coral reefs. Our aims are to (1) develop and apply simple models of connections between ecosystems that require little data and (2) incorporate different types of connectivity models into spatial conservation prioritization. We compared how, if at all, the locations and attributes (e.g., costs) of priorities differ from an approach that ignores connections. We analyzed spatial prioritization plans that allow for no connectivity, adjacent connectivity in the sea, symmetric and asymmetric land-sea connectivity, and the combination of adjacent connectivity in the sea and asymmetric land-sea connectivity. The overall reserve system costs were similar for all scenarios. We discovered that integrated planning delivered substantially different spatial priorities compared to the approach that ignored connections. Only 11-40% of sites that were high priority for conservation were similar between scenarios with and without connectivity. Many coral reefs that were a high priority when we considered adjacent connectivity in the sea and ignored land-sea connectivity were assigned to low priorities when symmetric land-sea connectivity was included, and vice versa. Our approach can be applied to incorporate connections between ecosystems.© 2013 Elsevier Ltd.
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Halpern BS, Klein CJ, Brown CJ, Beger M, Grantham HS, Mangubhai S, Ruckelshaus M, Tulloch VJ, Watts M, White C, Possingham HP Achieving the triple bottom line in the face of inherent trade-offs among social equity, economic return, and conservation Proceedings of the National Academy of Sciences of the United States of America 110 6229-6234, 2013
DOI:10.1073/pnas.1217689110
View abstract
Triple-bottom-line outcomes from resource management and conservation, where conservation goals and equity in social outcomes are maximized while overall costs are minimized, remain a highly sought-after ideal. However, despite widespread recognition of the importance that equitable distribution of benefits or costs across society can play in conservation success, little formal theory exists for how to explicitly incorporate equity into conservation planning and prioritization. Here, we develop that theory and implement it for three very different case studies in California (United States), Raja Ampat (Indonesia), and the wider Coral Triangle region (Southeast Asia). We show that equity tends to trade off nonlinearly with the potential to achieve conservation objectives, such that similar conservation outcomes can be possible with greater equity, to a point. However, these case studies also produce a range of trade-off typologies between equity and conservation, depending on how one defines and measures social equity, including direct (linear) and no trade-off. Important gaps remain in our understanding, most notably how equity influences probability of conservation success, in turn affecting the actual ability to achieve conservation objectives. Results here provide an important foundation for moving the science and practice of conservation planning-and broader spatial planning in general-toward more consistently achieving efficient, equitable, and effective outcomes.
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Cvitanovic C, Wilson SK, Fulton CJ, Almany GR, Anderson P, Babcock RC, Ban NC, Beeden RJ, Beger M, Cinner J, Dobbs K, Evans LS, Farnham A, Friedman KJ, Gale K, Gladstone W, Grafton Q, Graham NAJ, Gudge S, Harrison PL, Holmes TH, Johnstone N, Jones GP, Jordan A, Kendrick AJ, Klein CJ, Little LR, Malcolm HA, Morris D, Possingham HP, Prescott J, Pressey RL, Skilleter GA, Simpson C, Waples K, Wilson D, Williamson DH Critical research needs for managing coral reef marine protected areas: Perspectives of academics and managers Journal of Environmental Management 114 84-91, 2013
DOI:10.1016/j.jenvman.2012.10.051
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Marine protected areas (MPAs) are a primary policy instrument for managing and protecting coral reefs. Successful MPAs ultimately depend on knowledge-based decision making, where scientific research is integrated into management actions. Fourteen coral reef MPA managers and sixteen academics from eleven research, state and federal government institutions each outlined at least five pertinent research needs for improving the management of MPAs situated in Australian coral reefs. From this list of 173 key questions, we asked members of each group to rank questions in order of urgency, redundancy and importance, which allowed us to explore the extent of perceptional mismatch and overlap among the two groups. Our results suggest the mismatch among MPA managers and academics is small, with no significant difference among the groups in terms of their respective research interests, or the type of questions they pose. However, managers prioritised spatial management and monitoring as research themes, whilst academics identified climate change, resilience, spatial management, fishing and connectivity as the most important topics. Ranking of the posed questions by the two groups was also similar, although managers were less confident about the achievability of the posed research questions and whether questions represented a knowledge gap. We conclude that improved collaboration and knowledge transfer among management and academic groups can be used to achieve similar objectives and enhance the knowledge-based management of MPAs.© 2012 Elsevier Ltd.
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McClanahan TR, Donner SD, Maynard JA, MacNeil MA, Graham NAJ, Maina J, Baker AC, Alemu I JB, Beger M, Campbell SJ, Darling ES, Eakin CM, Heron SF, Jupiter SD, Lundquist CJ, McLeod E, Mumby PJ, Paddack MJ, Selig ER, van Woesik R Prioritizing Key Resilience Indicators to Support Coral Reef Management in a Changing Climate PLoS ONE 7, 2012
DOI:10.1371/journal.pone.0042884
View abstract
Managing coral reefs for resilience to climate change is a popular concept but has been difficult to implement because the empirical scientific evidence has either not been evaluated or is sometimes unsupportive of theory, which leads to uncertainty when considering methods and identifying priority reefs. We asked experts and reviewed the scientific literature for guidance on the multiple physical and biological factors that affect the ability of coral reefs to resist and recover from climate disturbance. Eleven key factors to inform decisions based on scaling scientific evidence and the achievability of quantifying the factors were identified. Factors important to resistance and recovery, which are important components of resilience, were not strongly related, and should be assessed independently. The abundance of resistant (heat-tolerant) coral species and past temperature variability were perceived to provide the greatest resistance to climate change, while coral recruitment rates, and macroalgae abundance were most influential in the recovery process. Based on the 11 key factors, we tested an evidence-based framework for climate change resilience in an Indonesian marine protected area. The results suggest our evidence-weighted framework improved upon existing un-weighted methods in terms of characterizing resilience and distinguishing priority sites. The evaluation supports the concept that, despite high ecological complexity, relatively few strong variables can be important in influencing ecosystem dynamics. This is the first rigorous assessment of factors promoting coral reef resilience based on their perceived importance, empirical evidence, and feasibility of measurement. There were few differences between scientists' perceptions of factor importance and the scientific evidence found in journal publications but more before and after impact studies will be required to fully test the validity of all the factors. The methods here will increase the feasibility and defensibility of including key resilience metrics in evaluations of coral reefs, as well as reduce costs. Adaptation, marine protected areas, priority setting, resistance, recovery.© 2012 McClanahan et al.
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Ceccarelli DM, Beger M, Kospartov MC, Richards ZT, Birrell CL Population trends of remote invertebrate resources in a Marine reserve: Trochus and holothurians at Ashmore Reef Pacific Conservation Biology 17 132-140, 2011
View abstract
Marine protected areas (MPAs) have a high capacity to protect fish and invertebrate resources, given adequate surveillance and enforcement. Ashmore Reef National Nature Reserve (Ashmore Reef) was closed to commercial fishing and harvesting of invertebrates such as trochus (Trochus niloticus) and holothurians in 1983. We evaluate population trends in trochus and holothurians during eight years of monitoring, focusing largely on the differences between their populations before and after a lapse of surveillance. The trochus population increased in density from 1998 to 2005, followed by a slight decline in all surveyed habitats in 2006. This decline followed approximately five consecutive months without surveillance. Amongst populations of 18 species of holothurians, densities declined in five, and remained relatively stable in the others. Densities of commercially valuable holothurians (primarily Holothuria whitmaei and H. fuscogilva) were too low to allow the detection of trends. Continuous enforcement of the fishing closure is important to ensure successful conservation of Ashmore Reef, as are standardized monitoring techniques to enable temporal trends to be detected with confidence.
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Rasaiah B, Peterson E, Beger M, Jones SD Bathymetry of near-shore zones in rongelap atoll, marshall islands using satellite imagery, 2011
View abstract
Large-scale mapping of remote coral reefs requires a sensor that offers imagery with the spatial, spectral, and radiometric resolution suitable for processing large datasets of shoreline and near-shore regions. This study tests the viability of ASTER imagery in deriving accurate bathymetry of nearshore zones in Rongelap, an atoll in the Marshall Islands. A depth estimation algorithm was developed by calculating the ratio between two bands of reflectance data from the ASTER image and estimates depth of the near-shore zones based on the ratio. A dataset of geopositioned in situ measurements using RTK-GPS was obtained with sonar and sounding lines to a depth of 30m. The depth estimates were then compared to the in situ depth readings as a basis for determining accuracy and sensitivity of the ASTER-based ratio algorithm. The results from the ASTER-based ratio algorithm indicate the importance of using blue band reflectance data in satellite-based bathymetric modelling.
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MacLeod ID, Richards V, Beger M The effects of human and biological interactions on the corrosion of WWII iron shipwrecks in Chuuk Lagoon, 2011
View abstract
The 65 Japanese shipwrecks from WWII that lie beneath the waters of Chuuk Lagoon in the Federated States of Micronesia provide a remarkable tourism and cultural resource that is degrading due to corrosion processes. A series of in-situ measurements on the extent of graphitisation of cast iron, the coverage by encrusting marine organisms and data on the pH and Ecorr of the metal has provided a unique insight into the long term corrosion of marine iron. The changes that have occurred as a result of both accidental and deliberate damage to the iron wrecks enables quantification of the impact of diving tourism and dynamite fishing. The study found that compared to an undisturbed unknown shipwreck, heavily dived and dynamite-fished wrecks displayed higher corrosion rates. A detailed analysis of the extent to which the encrusting marine organisms alter the corrosion mechanism illustrates the value of a holistic approach to corrosion surveys. Such a combination of electrochemical, metallurgical and marine biological assessments is essential if a proper understanding of iron corrosion in the marine environment is to be obtained, which in turn is essential to manage and conserve the wrecks.
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Richards ZT, Beger M A quantification of the standing stock of macro-debris in Majuro lagoon and its effect on hard coral communities Marine Pollution Bulletin 62 1693-1701, 2011
DOI:10.1016/j.marpolbul.2011.06.003
View abstract
The accumulation of debris is an insidious problem throughout the world's oceans. Here we document 234.24 items of macro-debris/km 2 in the shallow populated parts of Majuro lagoon (Republic of the Marshall Islands) which is the second highest standing stock of macro-debris recorded to date in any benthic marine habitat in the world. The majority of macro-debris was from household sources (78.7%) with the peak abundance recorded in areas of medium affluence. Marine debris causes suffocation, shading, tissue abrasion and mortality of corals and we show a significant negative correlation exists between the level of hard coral cover and coverage of marine debris. Given long decomposition times, even if the input of rubbish to Majuro lagoon is stopped immediately, the standing stock of debris will persist for centuries. Multiple new initiatives are needed to curtail the direct and indirect dumping of waste in Majuro lagoon.© 2011.
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Kininmonth S, Beger M, Bode M, Peterson E, Adams VM, Dorfman D, Brumbaugh DR, Possingham HP Dispersal connectivity and reserve selection for marine conservation Ecological Modelling 222 1272-1282, 2011
DOI:10.1016/j.ecolmodel.2011.01.012
View abstract
Although larval dispersal is crucial for the persistence of most marine populations, dispersal connectivity between sites is rarely considered in designing marine protected area networks. In particular the role of structural characteristics (known as topology) for the network of larval dispersal routes in the conservation of metapopulations has not been addressed. To determine reserve site configurations that provide highest persistence values with respect to their connectivity characteristics, we model nine connectivity topological models derived from graph theory in a demographic metapopulation model. We identify reserve site configurations that provide the highest persistence values for each of the metapopulation connectivity models. Except for the minimally connected and fully connected populations, we observed two general 'rules of thumb' for optimising the mean life time for all topological models: firstly place the majority of reserves, so that they are neighbours of each other, on the sites where the number of connections between the populations is highest (hub), secondly when the reserves have occupied the majority of the vertices in the hub, then select another area of high connectivity and repeat. If there are no suitable hubs remaining then distribute the remaining reserves to isolated locations optimising contact with non-reserved sites.© 2011 Elsevier B.V.
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Beger M, Babcock R, Booth DJ, Bucher D, Condie SA, Creese B, Cvitanovic C, Dalton SJ, Harrison P, Hoey A, Jordan A, Loder J, Malcolm H, Purcell SW, Roelfsma C, Sachs P, Smith SDA, Sommer B, Stuart-Smith R, Thomson D, Wallace CC, Zann M, Pandolfi JM Research challenges to improve the management and conservation of subtropical reefs to tackle climate change threats: (Findings of a workshop conducted in Coffs Harbour, Australia on 13 September 2010), 2011
DOI:10.1111/j.1442-8903.2011.00573.x
View abstract
This paper reports on a workshop conducted in Australia in 2010, entitled 'Management, Conservation, and Scientific Challenges on Subtropical Reefs under Climate Change'. The workshop brought together 26 experts actively involved in the science and management of subtropical reefs. Its primary aim was to identify the areas of research that need to be most urgently addressed to improve the decision-making framework for managers of subtropical reefs. The main findings of the workshop were a sustainable subtropical reefs declaration that highlights seven research priorities for subtropical reefs. These are to (i) conduct research and management activities across local government, state and bioregion borders; (ii) understand natural variability of environmental conditions; (iii) quantify socio-economic factors and ecosystem services; (iv) benchmark cross-realm connectivity; (v) know marine population connectivity; (vi) habitat mapping and ecological research; and (v) determine refugia. These findings are hoped to form a basis for focussing research efforts, leveraging funds and assisting managers with allocation of resources.© 2011 Ecological Society of Australia.
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Mora C, Aburto-Oropeza O, Ayala-Bocos A, Ayotte PM, Banks S, Bauman AG, Beger M, Bessudo S, Booth DJ, Brokovich E, Brooks A, Chabanet P, Cinner JE, Cortés J, Cruz-Motta JJ, Cupul-Magaña A, DeMartini EE, Edgar GJ, Feary DA, Ferse SCA, Friedlander AM, Gaston KJ, Gough C, Graham NAJ, Green A, Guzman H, Hardt M, Kulbicki M, Letourneur Y, Ĺpez-Pérez A, Loreau M, Loya Y, Martinez C, Mascareñas-Osorio I, Morove T, Nadon MO, Nakamura Y, Paredes G, Polunin NVC, Pratchett MS, Reyes Bonilla H, Rivera F, Sala E, Sandin SA, Soler G, Stuart-Smith R, Tessier E, Tittensor DP, Tupper M, Usseglio P, Vigliola L, Wantiez L, Williams I, Wilson SK, Zapata FA Global human footprint on the linkage between biodiversity and ecosystem functioning in reef fishes PLoS Biology 9, 2011
DOI:10.1371/journal.pbio.1000606
View abstract
Difficulties in scaling up theoretical and experimental results have raised controversy over the consequences of biodiversity loss for the functioning of natural ecosystems. Using a global survey of reef fish assemblages, we show that in contrast to previous theoretical and experimental studies, ecosystem functioning (as measured by standing biomass) scales in a non-saturating manner with biodiversity (as measured by species and functional richness) in this ecosystem. Our field study also shows a significant and negative interaction between human population density and biodiversity on ecosystem functioning (i.e., for the same human density there were larger reductions in standing biomass at more diverse reefs). Human effects were found to be related to fishing, coastal development, and land use stressors, and currently affect over 75% of the world's coral reefs. Our results indicate that the consequences of biodiversity loss in coral reefs have been considerably underestimated based on existing knowledge and that reef fish assemblages, particularly the most diverse, are greatly vulnerable to the expansion and intensity of anthropogenic stressors in coastal areas.© 2011 Mora et al.
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Baker N, Beger M, McClennen C, Ishoda A, Edwards F Reimaanlok: A National Framework for Conservation Area Planning in the Marshall Islands Journal of Marine Biology 2011, 2011
DOI:10.1155/2011/273034
Klein CJ, Ban NC, Halpern BS, Beger M, Game ET, Grantham HS, Green A, Klein TJ, Kininmonth S, Treml E, Wilson K, Possingham HP Prioritizing land and sea conservation investments to protect coral reefs PLoS ONE 5, 2010
DOI:10.1371/journal.pone.0012431
View abstract
Background: Coral reefs have exceptional biodiversity, support the livelihoods of millions of people, and are threatened by multiple human activities on land (e.g. farming) and in the sea (e.g. overfishing). Most conservation efforts occur at local scales and, when effective, can increase the resilience of coral reefs to global threats such as climate change (e.g. warming water and ocean acidification). Limited resources for conservation require that we efficiently prioritize where and how to best sustain coral reef ecosystems. Methodology/Principal Findings: Here we develop the first prioritization approach that can guide regional-scale conservation investments in land- and sea-based conservation actions that cost-effectively mitigate threats to coral reefs, and apply it to the Coral Triangle, an area of significant global attention and funding. Using information on threats to marine ecosystems, effectiveness of management actions at abating threats, and the management and opportunity costs of actions, we calculate the rate of return on investment in two conservation actions in sixteen ecoregions. We discover that marine conservation almost always trumps terrestrial conservation within any ecoregion, but terrestrial conservation in one ecoregion can be a better investment than marine conservation in another. We show how these results could be used to allocate a limited budget for conservation and compare them to priorities based on individual criteria. Conclusions/Significance: Previous prioritization approaches do not consider both land and sea-based threats or the socioeconomic costs of conserving coral reefs. A simple and transparent approach like ours is essential to support effective coral reef conservation decisions in a large and diverse region like the Coral Triangle, but can be applied at any scale and to other marine ecosystems.© 2010 Klein et al.
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Klein C, Kark S, Carvalho S, Beger M, Possingham H Conserving evolutionary novelty on the edge Science 328 1558-, 2010
Beger M, Grantham HS, Pressey RL, Wilson KA, Peterson EL, Dorfman D, Mumby PJ, Lourival R, Brumbaugh DR, Possingham HP Conservation planning for connectivity across marine, freshwater, and terrestrial realms Biological Conservation 143 565-575, 2010
DOI:10.1016/j.biocon.2009.11.006
View abstract
Conservation plans are usually developed for regions that encompass only one environmental realm (terrestrial, freshwater or marine) because of logistical, institutional and political constraints. This is inadequate because these realms often interact through processes that form, utilize and maintain interfaces or connections, which are essential for the persistence of some species and ecosystem functions. We present a conceptual framework for systematic conservation prioritization that explicitly accounts for the connectivity between the terrestrial, marine, and freshwater realms. We propose a classification of this connectivity that encompasses: (1) narrow interfaces, such as riparian strips; (2) broad interfaces, such as estuaries; (3) constrained connections, such as corridors of native vegetation used by amphibians to move between natal ponds and adult habitat; and (4) diffuse connections, such as the movements of animals between breeding and feeding habitats. We use this taxonomy of inter-realm connectivity to describe existing and new spatial conservation prioritization techniques that aim to promote the persistence of processes that operate between realms.© 2009 Elsevier Ltd. All rights reserved.
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Beger M, Linke S, Watts M, Game E, Treml E, Ball I, Possingham HP Incorporating asymmetric connectivity into spatial decision making for conservation Conservation Letters 3 359-368, 2010
DOI:10.1111/j.1755-263X.2010.00123.x
View abstract
Real patterns of ecological connectivity are seldom explicitly or systematically accounted for systematic conservation planning, in part because commonly used decision support systems can only capture simplistic notions of connectivity. Conventionally, the surrogates used to represent connectivity in conservation plans have assumed the connection between two sites to be symmetric in strength. In reality, ecological linkages between sites are rarely symmetric and often strongly asymmetric. Here, we develop a novel formulation that enabled us to incorporate asymmetric connectivity into the conservation decision support system Marxan. We illustrate this approach using hypothetical examples of a river catchment and a group of reefs, and then apply it to case studies in the Snowy River catchment and Great Barrier Reef, Australia. We show that incorporating asymmetric ecological connectivity in systematic reserve design leads to solutions that more effectively capture connectivity patterns, relative to either ignoring connectivity or assuming symmetric connectivity.© 2010 Wiley Periodicals, Inc..
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Beger M, Possingham HP Environmental factors that influence the distribution of coral reef fishes: Modeling occurrence data for broad-scale conservation and management Marine Ecology Progress Series 361 1-13, 2008
DOI:10.3354/meps07481
View abstract
To manage coral reef species, it is important to identify the factors that determine their distribution inexpensively. We identified the remotely measured environmental factors that are most influential in determining the distributions of coral reef fish species on a regional scale. Logistic regression models for 227 fish species related presence/absence data to 4 remotely determined environmental predictor variables: depth, presence of a land-sea interface, exposure, and the distance to the nearest estuary. We compared modeled Akaike information criterion (AIC) values with AIC values of randomly distributed species with different numbers of occurrences and levels of habitat specificity to evaluate model significance. Efficient species distribution models were identified for 118 predominantly habitat-specific fishes of the 227 species for which we had data. All 4 predictor variables significantly influenced the distributions of at least some fish species. Depth was the most frequently efficient variable for single variable models. For combinations of 2 predictor variables, depth and exposure, as well as depth and distance from the nearest estuary, were the prevalent predictors of fish distributions. Several fish species responded to the combination of variables distance from an estuary and presence of the terrestrial-marine interface, indicating that these species depend on intact coastal reef habitat, which is in decline near the main sediment-laden rivers. Statistically significant models were predominantly developed for habitat-specific species. These habitat-specific species are of greater conservation concern than widespread species because threats affect them more severely if the threats are selectively affecting their habitat. For this reason, species distribution modeling using remotely determined environmental data may be an efficient method to build models for habitat-specific species and inform marine reserve design.© Inter-Research 2008.
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Peterson EL, Beger M, Richards ZT Thinking outside the reef Science 319 1759-, 2008
Richards ZT, Beger M, Pinca S, Wallace CC Bikini Atoll coral biodiversity resilience five decades after nuclear testing Marine Pollution Bulletin 56 503-515, 2008
DOI:10.1016/j.marpolbul.2007.11.018
View abstract
Five decades after a series of nuclear tests began, we provide evidence that 70% of the Bikini Atoll zooxanthellate coral assemblage is resilient to large-scale anthropogenic disturbance. Species composition in 2002 was assessed and compared to that seen prior to nuclear testing. A total of 183 scleractinian coral species was recorded, compared to 126 species recorded in the previous study (excluding synonomies, 148 including synonomies). We found that 42 coral species may be locally extinct at Bikini. Fourteen of these losses may be pseudo-losses due to inconsistent taxonomy between the two studies or insufficient sampling in the second study, however 28 species appear to represent genuine losses. Of these losses, 16 species are obligate lagoonal specialists and 12 have wider habitat compatibility. Twelve species are recorded from Bikini for the first time. We suggest the highly diverse Rongelap Atoll to the east of Bikini may have contributed larval propagules to facilitate the partial resilience of coral biodiversity in the absence of additional anthropogenic threats.© 2007 Elsevier Ltd. All rights reserved.
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Beger M, McKenna SA, Possingham HP Effectiveness of surrogate taxa in the design of coral reef reserve systems in the Indo-Pacific Conservation Biology 21 1584-1593, 2007
DOI:10.1111/j.1523-1739.2007.00795.x
View abstract
Implementing systematically designed reserve systems is crucial to slowing the global decline of coral reef health and diversity. Yet, the paucity of spatial data for most coral reef taxa often requires conservation planners to design reserve systems based only on a subset of taxonomic groups as surrogates for all other taxa. In terrestrial systems the validity of surrogates for reserve design is established by testing for cross-taxon congruence (similarities in spatial patterns of species richness), but this concept has rarely been examined in the marine environment. We tested the suitability of taxa as conservation representation surrogates of coral reef species richness across the Indo-Pacific, based on species lists of fishes, corals, and mollusks from 167 sites. First, we tested the relevance of cross-taxon congruence patterns to predict these surrogacy patterns. We determined congruence between taxonomic groups by conducting a correlation analysis of dissimilarity values between pairs of sites. We then evaluated how well each taxonomic group represented the other groups in a marine reserve system selected by a greedy reserve-selection algorithm relative to reserve systems selected by chance. No taxonomic group we examined was a reliable surrogate for the other groups such that site selection based on that group always represented other taxa significantly better than random selection of sites. Sites selected based on hard corals represented the other taxonomic groups in a reserve system worse than randomly selected sites. Although we found high cross-taxon congruence between fishes and corals and between corals and mollusks, for some regions cross-taxon congruence was not always a reliable indicator of the ability of one taxonomic group to efficiently represent another in a reserve system. We concluded that in Indo-Pacific coral reef ecosystems one can only be sure that a target taxon is efficiently represented in a reserve system when data on that taxon are used to select a reserve system.© 2007 Society for Conservation Biology.
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Gerber LR, Beger M, McCarthy MA, Possingham HP A theory for optimal monitoring of marine reserves Ecology Letters 8 829-837, 2005
DOI:10.1111/j.1461-0248.2005.00784.x
View abstract
Monitoring of marine reserves has traditionally focused on the task of rejecting the null hypothesis that marine reserves have no impact on the population and community structure of harvested populations. We consider the role of monitoring of marine reserves to gain information needed for management decisions. In particular we use a decision theoretic framework to answer the question: how long should we monitor the recovery of an over-fished stock to determine the fraction of that stock to reserve? This exposes a natural tension between the cost (in terms of time and money) of additional monitoring, and the benefit of more accurately parameterizing a population model for the stock, that in turn leads to a better decision about the optimal size for the reserve with respect to harvesting. We found that the optimal monitoring time frame is rarely more than 5 years. A higher economic discount rate decreased the optimal monitoring time frame, making the expected benefit of more certainty about parameters in the system negligible compared with the expected gain from earlier exploitation.©2005 Blackwell Publishing Ltd/CNRS.
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Beger M, Harborne AR, Dacles TP, Solandt JL, Ledesma GL A framework of lessons learned from community-based marine reserves and its effectiveness in guiding a new coastal management initiative in the Philippines Environmental Management 34 786-801, 2004
DOI:10.1007/s00267-004-0149-z
View abstract
Community-based coastal resource management has been widely applied within the Philippines. However, small-scale community-based reserves are often inefficient owing to management inadequacies arising because of a lack of local support or enforcement or poor design. Because there are many potential pitfalls during the establishment of even small community-based reserves, it is important for coastal managers, communities, and facilitating institutions to have access to a summary of the key factors for success. Reviewing relevant literature, we present a framework of "lessons learned" during the establishment of protected areas, mainly in the Philippines. The framework contains summary guidance on the importance of (1) an island location, (2) small community population size, (3) minimal effect of land-based development, (4) application of a bottom-up approach, (5) an external facilitating institution, (6) acquisition of title, (7) use of a scientific information database, (8) stakeholder involvement, (9) the establishment of legislation, (10) community empowerment, (11) alternative livelihood schemes, (12) surveillance, (13) tangible management results, (14) continued involvement of external groups after reserve establishment, and (15) small-scale project expansion. These framework components guided the establishment of a community-based protected area at Danjugan Island, Negros Occidental, Philippines. This case study showed that the framework was a useful guide that led to establishing and implementing a community-based marine reserve. Evaluation of the reserve using standard criteria developed for the Philippines shows that the Danjugan Island protected area can be considered successful and sustainable. At Danjugan Island, all of the lessons synthesized in the framework were important and should be considered elsewhere, even for relatively small projects. As shown in previous projects in the Philippines, local involvement and stewardship of the protected area appeared particularly important for its successful implementation. The involvement of external organizations also seemed to have a key role in the success of the Danjugan Island project by guiding local decision-makers in the sociobiological principles of establishing protected areas. However, the relative importance of each component of the framework will vary between coastal management initiatives both within the Philippines and across the wider Asian region.© 2005 Springer Science+Business Media, Inc.
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Beger M, Jones GP, Munday PL Conservation of coral reef biodiversity: A comparison of reserve selection procedures for corals and fishes Biological Conservation 111 53-62, 2003
DOI:10.1016/S0006-3207(02)00249-5
View abstract
A range of different biodiversity-based selection methods for nature reserves has been tested for terrestrial environments, including those based on diversity hotspots, endemicity hotspots and complementarity. In this study, we investigate the utility of these approaches for a coral reef embayment. We compare coral and fish species richness in a random accumulation of reserve sites with (a) hotspots analysis, (b) stratified selection of hotspots, and (c) complementarity. Cumulative species-site curves indicated that complementarity maximized the rate of accumulation of species of both corals and fishes in reserves, while the hotspot approach performed moderately well. An equivalent number of reserve sites supported a greater proportion of the coral biodiversity when compared to fishes, reflecting the broader distribution of corals. Our results indicate that when choosing an indicator group as a proxy for representing overall diversity in a reserve network, the group with the greatest heterogeneity will provide the best results. Our findings also show that although a modest number of protected sites (20%) will incorporate much of the local diversity (>75%), species-specific approaches must be incorporated to target rare species.© 2002 Elsevier Science Ltd. All rights reserved.
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Solandt JL, Beger M, Dacles TP, Harding SP, Raines PS Effects of the 1998 bleaching event on a large Pavona clavus colony in a Philippine marine protected area Silliman Journal 44 19-33, 2003
Ledesma GL, Dacles TP, Raines PS, Solandt JL, Beger M, Harborne AR, Harding SP, Lizares J Spill-over effects of a community-based marine protected area: A case study from Negros Occidental Silliman Journal 44 61-80, 2003
Takashina N, Beger M, Kusumoto B, Rathnayake S, Possingham HP A theory for ecological survey methods to map individual distributions Theoretical Ecology, 2017
DOI:10.1007/s12080-017-0359-7
View abstract
Spatially explicit approaches are widely recommended for ecosystem management. The quality of the data, such as presence/absence or habitat maps, affects the management actions recommended and is, therefore, key to management success. However, available data are often biased and incomplete. Previous studies have advanced ways to resolve data bias and missing data, but questions remain about how we design ecological surveys to develop a dataset through field surveys. Ecological surveys may have multiple spatial scales, including the spatial extent of the target ecosystem (observation window), the resolution for mapping individual distributions (mapping unit), and the survey area within each mapping unit (sampling unit). We developed an ecological survey method for mapping individual distributions by applying spatially explicit stochastic models. We used spatial point processes to describe individual spatial placements using either random or clustering processes. We then designed ecological surveys with different spatial scales and individual detectability. We found that the choice of mapping unit affected the presence mapped fraction, and the fraction of the total individuals covered by the presence mapped patches. Tradeoffs were found between these quantities and the map resolution, associated with equivalent asymptotic behaviors for both metrics at sufficiently small and large mapping unit scales. Our approach enabled consideration of the effect of multiple spatial scales in surveys, and estimation of the survey outcomes such as the presence mapped fraction and the number of individuals situated in the presence detected units. The developed theory may facilitate management decision-making and inform the design of monitoring and data gathering.
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Zinke J, Gilmour JP, Fisher R, Puotinen M, Maina J, Darling E, Stat M, Richards ZT, Mcclanahan TR, Beger M, Moore C, Graham NAJ, Feng M, Hobbs JPA, Evans SN, Field S, Shedrawi G, Babcock RC, Wilson SK Gradients of disturbance and environmental conditions shape coral community structure for south-eastern Indian Ocean reefs Diversity and Distributions, 2018
DOI:10.1111/ddi.12714
View abstract
Aim: To describe, model and assess the relative importance of environmental and climatic factors likely influencing the regional distribution of coral cover and assemblages with contrasting life histories and susceptibilities to bleaching. Location: We compiled the first comprehensive empirical dataset for coral communities in the south-eastern Indian Ocean (SEIO), incorporating information from 392 sites along the western coast of Australia and offshore atolls/islands across ~19° of latitude. Methods: We assessed hard coral cover and community composition to genus using point-intercept transects or point-count analysis of digital images taken along transects. We explored spatial variation in environmental conditions and in composition of corals with contrasting life histories. After de-trending the temporal patterns, we assessed the relative importance of environmental metrics to coral cover, life histories and bleaching susceptibility using a full subsets model-selection approach with generalized additive mixed models, accounting for both temporal and among site variation. Results: The distribution of temperature, light, the frequency of temperature anomalies and tropical cyclones appear to be drivers of coral community structure. Functional diversity of low- to mid-latitude coral communities may convey some resilience to thermal stress, while higher latitudecommunities dominated by Competitive and Bleaching-Susceptible taxa may lack this functional resilience. These patterns likely reflect varying historical exposure to cyclones and temperature anomalies. Main conclusions: As evident in recent years, changing background conditions and regimes of disturbance in coming decades will shift the distribution, functional diversity and resilience of coral reefs throughout the SEIO. The rate and magnitude of environmental change will ultimately determine the future of the tropical reefs and whether the higher latitude reefs provide some refuge from climate change. Our study highlights the need to quantify the distributional properties of key environmental metrics to better understand and predict reef condition through coming decades.
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Jumin R, Binson A, McGowan J, Magupin S, Beger M, Brown CJ, Possingham HP, Klein C From Marxan to management: ocean zoning with stakeholders for Tun Mustapha Park in Sabah, Malaysia Oryx, 2017
DOI:10.1017/S0030605316001514
View abstract
Tun Mustapha Park, in Sabah, Malaysia, was gazetted in May 2016 and is the first multiple-use park in Malaysia where conservation, sustainable resource use and development co-occur within one management framework. We applied a systematic conservation planning tool, Marxan with Zones, and stakeholder consultation to design and revise the draft zoning plan. This process was facilitated by Sabah Parks, a government agency, and WWF-Malaysia, under the guidance of the Tun Mustapha Park steering committee and with support from the University of Queensland. Four conservation and fishing zones, including no-take areas, were developed, each with representation and replication targets for key marine habitats, and a range of socio-economic and community objectives. Here we report on how decision-support tools informed the reserve design process in three planning stages: prioritization, government review, and community consultation. Using marine habitat and species representation as a reporting metric, we describe how the zoning plan changed at each stage of the design process. We found that the changes made to the zoning plan by the government and stakeholders resulted in plans that compromised the achievement of conservation targets because no-take areas were moved away from villages and the coastline, where unique habitats are located. The design process highlights a number of lessons learned for future conservation zoning, which we believe will be useful as many other places embark on similar zoning processes on land and in the sea.
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McGowan J, Bode M, Holden MH, Davis K, Krueck NC, Beger M, Yates KL, Possingham HP Ocean zoning within a sparing versus sharing framework Theoretical Ecology, 2018
DOI:10.1007/s12080-017-0364-x
View abstract
The land-sparing versus land-sharing debate centers around how different intensities of habitat use can be coordinated to satisfy competing demands for biodiversity persistence and food production in agricultural landscapes. We apply the broad concepts from this debate to the sea and propose it as a framework to inform marine zoning based on three possible management strategies, establishing: no-take marine reserves, regulated fishing zones, and unregulated open-access areas. We develop a general model that maximizes standing fish biomass, given a fixed management budget while maintaining a minimum harvest level. We find that when management budgets are small, sea-sparing is the optimal management strategy because for all parameters tested, reserves are more cost-effective at increasing standing biomass than traditional fisheries management. For larger budgets, the optimal strategy switches to sea-sharing because, at a certain point, further investing to grow the no-take marine reserves reduces catch below the minimum harvest constraint. Our intention is to illustrate how general rules of thumb derived from plausible, single-purpose models can help guide marine protected area policy under our novel sparing and sharing framework. This work is the beginning of a basic theory for optimal zoning allocations and should be considered complementary to the more specific spatial planning literature for marine reserve as nations expand their marine protected area estates.
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